Information about Isoform

A protein isoform is a version of a protein with only small differences to another isoform of the same protein. Different forms of a protein may be produced from different but related genes, or may arise from the same gene by alternative splicing. A large number of isoforms are caused by single nucleotide polymorphisms, small genetic differences between alleles of the same gene.

The discovery of isoforms explains the apparently small number of coding genes revealed in the human genome project: the ability to create catalytically different proteins from the same gene increases the diversity of the proteome. Isoforms are readily described and discovered by microarray studies and cDNA libraries.

Glycoforms

A glycoform is an isoform where different ways of a glycoprotein have different polysaccharides attached to them, by either posttranslational or cotranslational modifications.

Examples

  • Creatine kinase, the presence of which in the blood can be used as an aid in the diagnosis of myocardial infarction, exists in 3 isoforms.
  • Hyaluronan synthase, the enzyme responsible for the production of hyaluronan, has three isoforms in mammalian cells.

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Proteins are large organic compounds made of amino acids arranged in a linear chain and joined together by peptide bonds between the carboxyl and amino groups of adjacent amino acid residues.
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A gene is a locatable region of genomic sequence, corresponding to a unit of inheritance, which is associated with regulatory regions, transcribed regions and/or other functional sequence regions.
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Alternative splicing is the RNA splicing variation mechanism in which the exons of the primary gene transcript, the pre-mRNA, are separated and reconnected so as to produce alternative ribonucleotide arrangements.
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single nucleotide polymorphism, or SNP (pronounced snip), is a DNA sequence variation occurring when a single nucleotide - A, T, C, or G - in the genome (or other shared sequence) differs between members of a species (or between paired chromosomes in an individual).
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An allele (Pronounced: /əˈlil/) is a viable DNA (deoxyribonucleic acid) coding that occupies a given locus (position) on a chromosome.
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A gene is a locatable region of genomic sequence, corresponding to a unit of inheritance, which is associated with regulatory regions, transcribed regions and/or other functional sequence regions.
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Different kinds of biological assays are called microarrays:
  • DNA microarrays, such as cDNA microarrays and oligonucleotide microarrays
  • Protein microarrays
  • Tissue microarrays
  • Transfection microarrays (also called cell microarrays)
  • Chemical Compound Microarrays

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Glycoproteins are proteins that contain oligosaccharide chains (glycans) covalently attached to their polypeptide backbones. Basically, glycoprotein is a biomolecule composed of a protein and a carbohydrate (an oligosaccharide).
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Polysaccharides are relatively complex carbohydrates. They are polymers made up of many monosaccharides joined together by glycosidic bonds. They are therefore very large, often branched, macromolecules. They tend to be amorphous, insoluble in water, and have no sweet taste.
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Creatine kinase (CK), also known as phosphocreatine kinase or creatine phosphokinase (CPK) is an enzyme (EC 2.7.3.2 ) expressed by various tissue types. It catalyses the conversion of creatine to phosphocreatine, consuming adenosine triphosphate (ATP) and generating
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Hyaluronan synthases (HAS) are membrane-bound enzymes which use UDP-α-N-acetyl-D-glucosamine and UDP-α-D-glucuronate as substrates to produce the glycosaminoglycan hyaluronan at the cell surface and extrude it through the membrane into the extracellular space.
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